BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F01LP1|AL427035
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1676 0.0
>3x_Contig1795
Length = 38452
Score = 1676 bits (844), Expect = 0.0
Identities = 845/846 (99%)
Strand = Plus / Plus
Query: 1 gatcttccaatcggctgtagttaagaaaacattgaatcctgtttggaacgaaaaggttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4625 gatcttccaatcggctgtagttaagaaaacattgaatcctgtttggaacgaaaaggttaa 4684
Query: 61 actcccagtcccatcgaggtccaggaacaagattgctgtccaagtctatgactgggacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4685 actcccagtcccatcgaggtccaggaacaagattgctgtccaagtctatgactgggacag 4744
Query: 121 ggcaggctctaatgatttattggctgagacggagtgggatgtacgcgatatgaccccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4745 ggcaggctctaatgatttattggctgagacggagtgggatgtacgcgatatgaccccaaa 4804
Query: 181 gaaggaagaatctttcaccttgaaattaagcccacaaggaactgtcaaattcaagtctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4805 gaaggaagaatctttcaccttgaaattaagcccacaaggaactgtcaaattcaagtctac 4864
Query: 241 tttcattccaaattacaacagaccacctgttgatgtcagtgaaggtgggttagctggtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4865 tttcattccaaattacaacagaccacctgttgatgtcagtgaaggtgggttagctggtgc 4924
Query: 301 atccctaaaggctgttggaaatgtcgccaactttggtgttgataccgtgagtggtgtcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4925 atccctaaaggctgttggaaatgtcgccaactttggtgttgataccgtgagtggtgtcgc 4984
Query: 361 ccaagtcggtgccggggtaactggtgctggtgttggcgctatgacaggggggttatctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4985 ccaagtcggtgccggggtaactggtgctggtgttggcgctatgacaggggggttatctaa 5044
Query: 421 gggtagccgtctattaaaaggatttggtggtaagagatctaaaaatggcggagaaagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5045 gggtagccgtctattaaaaggatttggtggtaagagatctaaaaatggcggagaaagcag 5104
Query: 481 ggactctaatgacggaaaaacgtccagctcatcttccgtgtcgaattttggattcgaccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5105 ggactctaatgacggaaaaacgtccagctcatcttccgtgtcgaattttggattcgaccc 5164
Query: 541 atctgttcccaacacttcgtacgcttctgttcgagctcaaacggcacctacggtatctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5165 atctgttcccaacacttcgtacgcttctgttcgagctcaaacggcacctacggtatctgc 5224
Query: 601 gaagggggattccagtatccaagatccacatggtgcaattcataagaggagtttgtctgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5225 gaagggggattccagtatccaagatccacatggtgcaattcataagaggagtttgtctgc 5284
Query: 661 tgctagtaatttctcgcgtagtacaattcctggttcacacaagggtaaagcaaccattat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5285 tgctagtaatttctcgcgtagtacaattcctggttcacacaagggtaaagcaaccattat 5344
Query: 721 tggcgctgaaaacttaggcaaagctgtccaagtaagagtctcattggcacaaggkgggag 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5345 tggcgctgaaaacttaggcaaagctgtccaagtaagagtctcattggcacaaggtgggag 5404
Query: 781 aattagacatctacatagaactcatgaacgtaaggctgatgaaaatggagtttgccaatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5405 aattagacatctacatagaactcatgaacgtaaggctgatgaaaatggagtttgccaatt 5464
Query: 841 caacga 846
||||||
Sbjct: 5465 caacga 5470
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4739
Number of Sequences: 1807
Number of extensions: 4739
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)